stable

python-spyking-circus-0.9.7-1.fc32

FEDORA-2020-f7314234a8 created by ankursinha 4 years ago for Fedora 32

https://github.com/spyking-circus/spyking-circus

A fast and scalable solution for spike sorting of large-scale extracellular recordings

SpyKING CIRCUS is a python code to allow fast spike sorting on multi channel recordings. A publication on the algorithm can be found at https://elifesciences.org/articles/34518 It has been tested on datasets coming from in vitro retina with 252 electrodes MEA, from in vivo hippocampus with tetrodes, in vivo and in vitro cortex data with 30 and up to 4225 channels, with good results. Synthetic tests on these data show that cells firing at more than 0.5Hz can be detected, and their spikes recovered with error rates at around 1%, even resolving overlapping spikes and synchronous firing. It seems to be compatible with optogenetic stimulation, based on experimental data obtained in the retina.

How to install

Updates may require up to 24 hours to propagate to mirrors. If the following command doesn't work, please retry later:

sudo dnf install --refresh --advisory=FEDORA-2020-f7314234a8 \*

This update has been submitted for testing by ankursinha.

4 years ago

This update's test gating status has been changed to 'waiting'.

4 years ago

This update's test gating status has been changed to 'ignored'.

4 years ago

This update has been pushed to testing.

4 years ago

This update can be pushed to stable now if the maintainer wishes

4 years ago

This update has been submitted for stable by bodhi.

4 years ago

This update has been pushed to stable.

4 years ago

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Metadata
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newpackage
Karma
0
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Content Type
RPM
Test Gating
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Unstable by Karma
-3
Stable by Karma
2
Stable by Time
7 days
Dates
submitted
4 years ago
in testing
4 years ago
in stable
4 years ago
BZ#1827948 Review Request: python-spyking-circus - Fast and scalable spike sorting of large-scale extracellular recordings
0
0

Automated Test Results