python-hdmf-3.10.0-1.fc39 and python-pynwb-2.5.0-2.fc39

FEDORA-2023-e8f79b0cf1 created by music 9 months ago for Fedora 39

Update python-hdmf to 3.10.0 and python-pynwb to 2.5.0.

HDMF 3.10.0 (October 3, 2023)

Since version 3.9.1 should have been released as 3.10.0 but failed to release on PyPI and conda-forge, this release will increase the minor version number to 3.10.0. See the 3.9.1 release notes below for new features.

Bug fixes

  • Fixed issue with testing and deployment of releases. #957

HDMF 3.9.1 (September 29, 2023)


  • Updated TermSet to be used with TermSetWrapper, allowing for general use of validation for datasets and attributes. This also brings updates to HERD integration and updates on write to easily add references for wrapped datasets/attributes. @mavaylon1 #950

Minor improvements

  • Removed warning when namespaces are loaded and the attribute marking where the specs are cached is missing. #926

Bug fixes

  • Fixed bug allowing DynamicTable to be constructed with empty id column when initializing all columns via AbstractDataChunkIterator objects. @oruebel #953

PyNWB 2.5.0 (August 18, 2023)

Enhancements and minor changes

  • Add TimeSeries.get_timestamps()
  • Add TimeSeries.get_data_in_units()
  • Updated ExternalResources name change to HERD, along with HDMF 3.9.0 being the new minimum.

Documentation and tutorial enhancements

  • Updated streaming tutorial to ensure code is run on tests and clarify text.
  • Fixed minor documentation build warnings and broken links to basic_trials tutorial

PyNWB 2.4.1 (July 26, 2023)

  • Stop running validation tests as part of integration tests. They cause issues in CI and can be run separately.

PyNWB 2.4.0 (July 23, 2023)

Enhancements and minor changes

  • Add support for ExternalResources.
  • Update links for making a release.

Bug fixes

  • Fixed sphinx-gallery setting to correctly display index in the docs with sphinx-gallery>=0.11.

Documentation and tutorial enhancements

  • Added thumbnail for Optogentics tutorial.
  • Update and fix errors in tutorials.

How to install

Updates may require up to 24 hours to propagate to mirrors. If the following command doesn't work, please retry later:

sudo dnf upgrade --refresh --advisory=FEDORA-2023-e8f79b0cf1

This update's test gating status has been changed to 'waiting'.

9 months ago

This update has been submitted for testing by bodhi.

9 months ago

This update's test gating status has been changed to 'ignored'.

9 months ago

This update has been pushed to testing.

9 months ago

This update has been submitted for stable by bodhi.

There is an ongoing freeze; this will be pushed to stable after the freeze is over.

9 months ago

This update has been pushed to stable.

8 months ago

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Content Type
Test Gating
Unstable by Karma
Stable by Karma
Stable by Time
7 days
9 months ago
in testing
9 months ago
in stable
8 months ago
9 months ago
BZ#2241592 python-hdmf-3.10.0 is available

Automated Test Results