stable

python-snakemake-executor-plugin-slurm-0.8.0-1.fc40, python-snakemake-interface-executor-plugins-9.2.0-1.fc40, & 3 more

FEDORA-2024-7a367f4a2e created by music a year ago for Fedora 40

snakemake 8.16.0 (2024-07-09)

Features

  • added snakemake.script.snakemake for type hinting

Documentation

  • use note directive to align with the capabilities of the used theme

snakemake 8.15.2 (2024-07-05)

Bug Fixes

  • ensure that envvars in local storage prefix are not prematurely expanded by the shell
  • fix circular import

snakemake 8.15.1 (2024-07-04)

Bug Fixes

  • implement support for --touch on remote storage (if the storage provider supports it)

snakemake 8.15.0 (2024-07-04)

Features

  • add can_transfer_local_files to executor plugin interface

Bug Fixes

  • duplicate wildcards
  • handling of missing attributes in input/output/params lists that have been guarded against misuse (sort, index)
  • improve error message in case of invalid default storage prefix
  • include more context to syntax errors when rule parsing fails
  • parse f-string as-is from source
  • sanitize old local storage copies before evaluating params or resource functions
  • suppress printing of non-constant or uninteresting defaults in --help

Documentation

  • fix code block formatting
  • fix signature display

python-snakemake-storage-plugin-fs 1.0.5 (2024-07-04)

Bug Fixes

  • fix touch and retrieval of mtime for directories

python-snakemake-interface-storage-plugins 3.2.3 (2024-07-04)

Bug Fixes

  • fix name of touch operation attribute
  • return type of local_suffix

python-snakemake-interface-executor-plugins 9.2.0 (2024-07-04)

Features

  • add a default for the can_transfer_local_files interface
  • support for commas in wildcards

python-snakemake-executor-plugin-slurm 0.8.0 (2024-07-12)

Features

python-snakemake-executor-plugin-slurm 0.7.0 (2024-06-25)

Features

  • warning if run in job

Bug Fixes

  • null byte account guess

Documentation

  • added mini paragraph about Conda and Env Modules
  • added paragraphs about dynamic resource allocation
  • storage update

How to install

Updates may require up to 24 hours to propagate to mirrors. If the following command doesn't work, please retry later:

sudo dnf upgrade --refresh --advisory=FEDORA-2024-7a367f4a2e

This update's test gating status has been changed to 'waiting'.

a year ago

This update's test gating status has been changed to 'ignored'.

a year ago

music edited this update.

a year ago

This update has been submitted for testing by bodhi.

a year ago

music edited this update.

New build(s):

  • python-snakemake-interface-executor-plugins-9.2.0-1.fc40

Karma has been reset.

a year ago

music edited this update.

New build(s):

  • python-snakemake-storage-plugin-fs-1.0.5-1.fc40
  • python-snakemake-interface-storage-plugins-3.2.3-1.fc40

Karma has been reset.

a year ago

This update has been pushed to testing.

a year ago

This update's test gating status has been changed to 'waiting'.

a year ago

This update's test gating status has been changed to 'ignored'.

a year ago

music edited this update.

New build(s):

  • snakemake-8.15.2-1.fc40

Karma has been reset.

a year ago

This update has been submitted for testing by music.

a year ago

This update has been pushed to testing.

a year ago

music edited this update.

a year ago

music edited this update.

New build(s):

  • snakemake-8.16.0-1.fc40

Removed build(s):

  • snakemake-8.15.2-1.fc40

Karma has been reset.

a year ago

This update has been submitted for testing by music.

a year ago

This update has been pushed to testing.

a year ago

music edited this update.

a year ago

music edited this update.

a year ago

music edited this update.

New build(s):

  • python-snakemake-executor-plugin-slurm-0.8.0-1.fc40

Removed build(s):

  • python-snakemake-executor-plugin-slurm-0.7.0-1.fc40

Karma has been reset.

a year ago

This update has been submitted for testing by music.

a year ago

This update has been pushed to testing.

a year ago

This update has been submitted for stable by bodhi.

a year ago

This update has been pushed to stable.

a year ago

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Metadata
Type
bugfix
Karma
0
Signed
Content Type
RPM
Test Gating
Autopush Settings
Unstable by Karma
-3
Stable by Karma
3
Stable by Time
7 days
Dates
submitted
a year ago
in testing
a year ago
in stable
a year ago
modified
a year ago
approved
a year ago
BZ#2295729 python-snakemake-executor-plugin-slurm-0.7.0 is available
0
0
BZ#2295974 python-snakemake-interface-executor-plugins-9.2.0 is available
0
0
BZ#2295975 python-snakemake-interface-storage-plugins-3.2.3 is available
0
0
BZ#2295976 python-snakemake-storage-plugin-fs-1.0.5 is available
0
0
BZ#2295978 snakemake-8.15.2 is available
0
0
BZ#2297081 snakemake-8.16.0 is available
0
0
BZ#2298062 python-snakemake-executor-plugin-slurm-0.8.0 is available
0
0

Automated Test Results